PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0113s0058.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 385aa    MW: 41122.7 Da    PI: 8.7663
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0113s0058.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.91.6e-1044131185
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                          +Wt+  v + ++   e+  +++ ++l++++W+ev +++      e+g   + kqC++k++ l+kr++++ke+ + +   + s++++f+++
  Mapoly0113s0058.1.p  44 EWTDVAVATFLDCFAEKYAAVKHKNLRGKDWKEVVDNLnkrcvPEGGPFFEYKQCRNKLDGLKKRFRQEKESLNAN--SQPSKWQWFSRM 131
                          5************************************988888888888899**********************96..45557****999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.4E-1543134No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MMASGLAGAG IGVGVGVVGS GEGLRFRDLV TGETGAGGAK GAAEWTDVAV ATFLDCFAEK  60
YAAVKHKNLR GKDWKEVVDN LNKRCVPEGG PFFEYKQCRN KLDGLKKRFR QEKESLNANS  120
QPSKWQWFSR MCELKGKRAP RVNSSAGVGA GVGVVGGIAP IGGVGGIVPG IVVPLEKSEL  180
DLTEGADNTS DSKEQPDGTD GLPGGLPGDL PDGVGTPFCS QNEADTASPR SKPRAGVGKK  240
TRKRRRSHLH TPCAPELMPV GPNKQPFLWP GDAAQRRPVA TDRTYKLKIK RSGEEDFDDL  300
FHLTGDTVQD LIDSFKSVYW EEENTQVRVQ LKDKVSDAWV TVAPSVSLSQ YGIEAQIIIK  360
PQGSRVLGYP AIPLTVGQMV LPGV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241245RKRRR
2241246RKRRRS
3242247KRRRSH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP4871684
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.23e-17Trihelix family protein